Publications
Incomplete Directed Perfect Phylogeny.
SIAM Journal on Computing. 33(3), 590-607.
(2004). Multiplexing Schemes for Generic SNP Genotyping Assays.
Proceedings of PSB'04. 140-151.
(2004). A Note on Optimally Phasing Long Genomic Regions Using Local Haplotype Predictions.
Journal of Bioinformatics and Computational Biology. 4(3), 639-647.
(2006).
(2004).
Optimally Phasing Long Genomic Regions using Local Haplotype Predictions.
Proceedings of the Second RECOMB Satellite Workshop on Computational Methods for SNPs and Haplotypes. 13-16.
(2004).
(2004).
Prediction of Phenotype Information from Genotype Data.
Communications in Information and Systems. 10(2), 99-114.
(2010).
(2012).
Reconstructing Chain Functions in Genetic Networks.
Proceedings of the Ninth Pacific Symposium on Biocomputing (PSB'04). 498-509.
(2004). Revealing Modularity and Organization in the Yeast Molecular Network by Integrated Analysis of Highly Heterogeneous Genome-Wide Data.
Proceedings of the National Academy of Sciences of the United States of America. 101(9), 2981-2986.
(2004). Scoring Clustering Solutions by Their Biological Relevance.
Bioinformatics. 2381-2389.
(2003). Topology-Free Querying of Protein Interaction Networks.
Journal of Computational Biology. 17(3), 237-252.
(2010). Torque: Topology-Free Querying of Protein Interaction Networks.
Nucleic Acids Research. 37, 106-108.
(2009).
(2009). Torque: Topology-Free Querying of Protein Interaction Networks.
Journal of Computational Biology. 17(3), 237-252.
(2010). Towards Optimally Multiplexed Applications of Universal Arrays.
Journal of Computational Biology. 11, 477-493.
(2004). Towards Optimally Multiplexed Applications of Universal DNA Tag Systems.
Proceedings of the Seventh Annual International Conference on Research in Computational Molecular Biology (RECOMB'03).
(2003).