Publications
A Discriminative Model for Identifying Spatial Cis-Regulatory Modules.
Journal of Computational Biology.
(2005). Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks.
Journal of Computational Biology. 13, 133-144.
(2006). Genome-Wide In-silico Determination of Transcriptional Regulation Modules Controlling Cell Cycle in Human Cells.
Genome Research. 773-780.
(2003). Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data.
Journal of Computational Biology. 12(6), 835-846.
(2005). Incomplete Directed Perfect Phylogeny.
SIAM Journal on Computing. 33(3), 590-607.
(2004). A Note on Optimally Phasing Long Genomic Regions Using Local Haplotype Predictions.
Journal of Bioinformatics and Computational Biology. 4(3), 639-647.
(2006).
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(2004). Prediction of Phenotype Information from Genotype Data.
Communications in Information and Systems. 10(2), 99-114.
(2010). Scoring Clustering Solutions by Their Biological Relevance.
Bioinformatics. 2381-2389.
(2003). Topology-Free Querying of Protein Interaction Networks.
Journal of Computational Biology. 17(3), 237-252.
(2010). Torque: Topology-Free Querying of Protein Interaction Networks.
Nucleic Acids Research. 37, 106-108.
(2009). Torque: Topology-Free Querying of Protein Interaction Networks.
Journal of Computational Biology. 17(3), 237-252.
(2010). Towards Optimally Multiplexed Applications of Universal Arrays.
Journal of Computational Biology. 11, 477-493.
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